Computational study on the interactions and orientation of monoclonal human immunoglobulin G on a polystyrene surface

نویسندگان

  • Namsrai Javkhlantugs
  • Hexig Bayar
  • Chimed Ganzorig
  • Kazuyoshi Ueda
چکیده

Having a theoretical understanding of the orientation of immunoglobulin on an immobilized solid surface is important in biomedical pathogen-detecting systems and cellular analysis. Despite the stable adsorption of immunoglobulin on a polystyrene (PS) surface that has been applied in many kinds of immunoassays, there are many uncertainties in antibody-based clinical and biological experimental methods. To understand the binding mechanism and physicochemical interactions between immunoglobulin and the PS surface at the atomic level, we investigated the binding behavior and interactions of the monoclonal immunoglobulin G (IgG) on the PS surface using the computational method. In our docking simulation with the different arrangement of translational and rotational orientation of IgG onto the PS surface, three typical orientation patterns of the immunoglobulin G on the PS surface were found. We precisely analyzed these orientation patterns and clarified how the immunoglobulin G interacts with the PS surface at atomic scale in the beginning of the adsorption process. Major driving forces for the adsorption of IgG onto the PS surface come from serine (Ser), aspartic acid (Asp), and glutamic acid (Glu) residues.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

تعیین اپی توپ های ناپیوسته زنجیره سبک ایمونوگلوبولین انسان توسط ایمونولوژی محاسبه ای

Background: Immunoglobulins are a group of proteins that have important role in defense against microorganisms. Immunoglobulins consist of heavy and light chains. In human, immunoglobulin light chain comprises of two isotypes: Kappa (K) and lambda (λ) based on amino acid differences in carboxylic end of their constant region. Marked changes in the K to λ ratio can happen in monocl...

متن کامل

Determination of Superficial Clefts on Fragment of Antigen Binding in Human Immunoglobulin G by Computational Immunology

Background: Immunoglobulins (Igs) are protective glycoproteins specifically identify and eradicate microbes. Fragment of antigen binding (Fab) is a portion of antibody which binds to antigen and consists of one variable and one constant domain of one heavy and one light chain. Idiotypes, epitopes situated on Igs variable region, could be exploited to monitor and target malignant B cells and are...

متن کامل

Identification of conformational epitopes on fragment crystallizable region of human Immunoglobulin G by immunoinformatic

Background: Immunoglobulins are a group of proteins have important role in defense against microorganisms. Human immunoglobulins are divided into five classes: IgA, IgM, IgD, IgE and IgG. Immunoglobulin G (IgG) is the highest abundant antibody in serum and extravascular fluids. The extent of serum IgG is related to severity of several diseases such as infections, so IgG has great diagnostic wor...

متن کامل

بررسی اپی توپ های خطی ایمونوژن ایمونوگلوبولین G انسان به روش ایمونوانفورماتیک

  Background and objective : Immunoglobulin G (IgG) is the most abundant antibody in serum and extracellular fluids. The amount of serum IgG is associated to severity of some diseases like immunodeficiency, infections and autoimmunity. Therefore IgG has a high diagnostic value. Immunoinformatic is a branch of immunology which helps in solving of immunologic problems, well understanding of immun...

متن کامل

Nano-Hybrids Based on Surface Modified Reduced Graphene Oxide Nanosheets and Carbon Nanotubes and a Regioregular Polythiophene

    The multi-walled carbon nanotubes (CNTs) and reduced graphene oxide (rGO) nanosheets were functionalized with 2-hydroxymethyl thiophene (CNT-f-COOTh) and 2-thiophene acetic acid (rGO-f-TAA) and grafted with poly(3-dodecylthiophene) (CNT-g-PDDT and rGO-g-PDDT) to manipulate the orientation and patterning of crystallized regioregular poly(3-hexylthiophene) (P3HT). Distinct nano-hybrid structu...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره 8  شماره 

صفحات  -

تاریخ انتشار 2013